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Delete Old Data First - Bug on 2.1.0?

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Delete Old Data First - Bug on 2.1.0?
I needed to make some modifications to the data in my Users table so I exported the data out, and made the changes. Then when I imported it back into Links SQL 2.1.0, I selected the option "Delete old data first", This deleted the data not only from the Users table (as I had expected), but also wiped out everything from the Links table as well. Is that the way it is supposed to function, or is it a bug perhaps? I was hoping it would be possible to replace the data in the Users table without affecting the other tables. Does anyone know about this?